The Mathematical Institute, University of Oxford, Eprints Archive

Items where Year is 2012

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Number of items: 178.

Al-Shammari, A A and Gaffney, E. A. and Egginton, S (2012) Re-evaluating the use of voronoi tessellations in the assessment of oxygen supply from capillaries in muscle. Bulletin of Mathematical Biology, 74 (9). pp. 2204-2231.

Abdulle, A. and Vilmart, G. and Zygalakis, K. C. (2012) Second weak order explicit stabilized methods for stiff
stochastic differential equations.
SIAM Journal on Scientific Computing . (Submitted)

Allen, R. and Reis, T. and Sun, S. (2012) A new Lattice Boltzmann equation to simulate density-driven convection of carbon dioxide. Proceedings for the Society of Petroleum Engineering . (Submitted)

Amsalu, Saba and Hauser, Raphael and Matzinger, Heinrich (2012) A Monte Carlo Approach to the Fluctuation Problem in Optimal Alignments of Random Strings. Technical Report. Unspecified. (Submitted)

Aragón, J. L. and Barrio, R. A. and Woolley, T. E. and Baker, R. E. and Maini, P. K. (2012) Non-linear effects on Turing patterns: time oscillations and chaos. Physical Review Letters . (Submitted)

Aragón, J. L. and Barrio, R. A. and Woolley, T. E. and Baker, R. E. and Maini, P. K. (2012) Nonlinear effects on Turing patterns: time oscillations and chaos. Physical Review E, 86 (2). 026201-1. ISSN 1063-651X

Aumaitre, E. and Knoche, S. and Cicuta, P. and Vella, D. (2012) Wrinkling in the deflation of elastic bubbles. EPL . (Submitted)

Baker, R. E. and Simpson, M J (2012) Models of collective cell motion for cell populations with different aspect ratio: diffusion, proliferation & travelling waves. Physica A, 391 (14). pp. 3729-3750.

Barry Cooper, S and Maini, P. K. (2012) The mathematics of nature at the Alan Turing centenary. Interface Focus, 2 . pp. 393-396.

Basanta, D and Scott, J G and Fishman, M N and Ayala, G and Hayward, S W and Anderson, A R A (2012) Investigating prostate cancer tumour-stroma interactions - clinical and biological insights from an evolutionary game. British Journal of Cancer, 106 (1). pp. 174-181. ISSN 0007-0920

Bell, C. G. and Byrne, H. M. and Whiteley, J. P. and Waters, S. L. (2012) A note on heat and mass transfer from a sphere in Stokes
flow at low Péclet number.
Applied Mathematics Letters . (Submitted)

Bosch, J. and Stoll, M. and Benner, P. (2012) Fast solution of Cahn-Hilliard variational inequalities using implicit time discretization and finite elements. Journal of Computational Physics . (Submitted)

Bressloff, P. C. and Lai, Y. M. (2012) Dispersal and noise: Various modes of synchrony in
ecological oscillators.
Journal of Mathematical Biology . (Submitted)

Bressloff, P. C. and Newby, J. M. (2012) Stochastic models of intracellular transport. Reviews of Modern Physics . (Submitted)

Bruna, M. and Chapman, S. J. (2012) Diffusion of multiple species with excluded-volume effects. Journal of Chemical Physics . (Submitted)

Bueno-Orovio, A. and Kay, D. and Burrage, K. (2012) Fourier spectral methods for fractional-in-space reaction-diffusion equations. Journal of Computational Physics . (Submitted)

Byrne, H. M. (2012) Mathematical biomedicine and modeling avascular tumor growth. In: Mathematics and Life Sciences. De Gruyter. (Submitted)

Chen, W. and Erban, R. and Chapman, S. J. (2012) From Brownian dynamics to Markov chain: an ion channel example. SIAM Journal on Applied Mathematics . (Submitted)

Collins-Hooper, H. and Woolley, T. E. and Dyson, L and Patel, A. and Potter, P. and Baker, R. E. and Gaffney, E. A. and Maini, P. K. and Dash, P. R. and Patel, K. (2012) Age-related changes in speed & mechanism of adult skeletal muscle stem cell migration. Stem Cells, 30 (6). pp. 1182-1195.

Collins-Hooper, H. and Woolley, T. E. and Dyson, L and Patel, A. and Potter, P. and Baker, R. E. and Gaffney, E. A. and Maini, P. K. and Dash, P. R. and Patel, K. (2012) Age related changes in speed and mechanism of adult skeletal
muscle stem cell migration.
Stem Cells .

Connor, A. J. and Cooper, J and Byrne, H. M. and Maini, P. K. and McKeever, S. (2012) Object-oriented paradigms for modelling vascular tumor growth: a case study. In: The Fourth International Conference on Advances in Systems Simulation. Simul 2012 . Iaria, Lisbon, pp. 74-83.

Connor, A. J. and Cooper, J. and Byrne, H. M. and Maini, P. K. and McKeever, S. (2012) Object-Oriented Paradigms for Modelling Vascular
Tumour Growth: a Case Study.
In: SIMUL2012. (Submitted)

Cotter, S. L. and Roberts, G. O. and Stuart, A. M. and White, D. (2012) MCMC methods for functions modifying old algorithms to make
them faster.
Statistical Science . (Submitted)

Cross, R. and McNamara, H. and Kalachev, L. and Pokrovski, A. (2012) Memory of recessions. Journal of Post Keynesian Economics .

Davit, Y. and Byrne, H. M. and Osborne, J. M. and Pitt-Francis, J. M. and Gavaghan, D. J. and Quintard, M. (2012) Solute transport within porous biofilms: diffusion or dispersion? Physical Review E . (Submitted)

Davit, Y. and Osborne, J. M. and Byrne, H. M. and Gavaghan, D. J. and Pitt-Francis, J. M. (2012) Validity of the Cauchy-Born rule applied to discrete cellular-scale models of biological tissues. Physical Review E . (Submitted)

Davit, Y. and Wood, B. D. and Debenest, G. and Quintard, M. (2012) Correspondence between one- and two-equation models for solute
transport in two-region heterogeneous porous media.
Transport in Porous Media . (Submitted)

Dawei, Cai (2012) An Optimal Liquidation Algorithm Based on Monte Carlo Method. Masters thesis, University of Oxford.

deBotton, G. and Bustamante, R. and Dorfmann, A. (2012) Axisymmetric bifurcations of thick spherical shells under inflation and compression. International Journal of Solids and Structures . (Submitted)

Diening, Lars and Kreuzer, Christian and Schwarzacher, Sebastian (2012) Convex hull property and maximum principles for finite element minimizers of general convex functionals. Technical Report. Numerische Mathematik. (Submitted)

Diening, Lars and Kreuzer, Christian and Suli, Endre (2012) Finite element approximation of steady flows of incompressible fluids with implicit power-law-like rheology. Technical Report. SINUM. (Submitted)

Dunn, S J and Fletcher, A G and Chapman, S. J. and Gavaghan, D. J. and Osborne, J. M. (2012) Modelling the role of the basement membrane beneath a growing epithelial monolayer. Journal of Theoretical Biology, 298 (1). pp. 82-91.

Dyson, L and Maini, P. K. and Baker, R. E. (2012) Macroscopic limits of individual-based models for motile cell populations with volume exclusion. Physical Review E, 86 (3). 031903-1-031903-5.

Erban, R. and Flegg, M. B. and Papoian, G. A. (2012) Multiscale stochastic reaction-diffusion modelling: application to actin dynamics in filopodia. Bulletin of Mathematical Biology . (Submitted)

Euget, Thomas (2012) Computing Greeks with Multilevel Monte Carlo Methods using Importance Sampling. Masters thesis, University of Oxford.

Figueredo, G. and Joshi, T. and Osborne, J. and Byrne, H. M. and Owen, M. (2012) On-lattice agent-based simulation of populations of cells within the open-source chaste framework. Interface Focus . (Submitted)

Fletcher, A G and Breward, C. J. W. and Chapman, S. J. (2012) Mathematical modeling of monoclonal conversion in the colonic crypt. Journal of Theoretical Biology, 300 (1). pp. 118-133.

Fowkes, J. M. and Gould, N. I. M. and Farmer, C. L. (2012) A Branch and Bound Algorithm for the Global Optimization of Hessian Lipschitz Continuous Functions. Journal of Global Optimization . (Submitted)

Franz, B. and Flegg, M. B. and Chapman, S. J. and Erban, R. (2012) Multiscale reaction-diffusion algorithms: pde-assisted
Brownian dynamics.
SIAM Journal on Applied Mathematics . (Submitted)

Furati, K. M. (2012) Bounds on the solution of a Cauchy-type problem involving a weighted sequential fractional derivative. Fractional Calculus and Applied Analysis . (Submitted)

Güttel, S. and Pestana, J. (2012) Some observations on weighted GMRES. Numerical Algorithms . (Submitted)

Giles, M.B. and Reisinger, Christoph (2012) Stochastic finite differences and multilevel Monte Carlo for a class of SPDEs in finance. SIAM Journal on Financial Mathematics, 3 (1). pp. 572-592.

Gilmore, S J and Vaughan, B J and Madzvamuse, A. and Maini, P. K. (2012) A mechanochemical model of striae distensae. Mathematical Biosciences, 240 (2). pp. 141-147.

Goriely, A. and Moulton, D. E. (2012) The Mathematics Behind Sherlock Holmes: A Game of Shadows. SIAM News .

Griffiths, I. M. and Breward, C. J. W. and Colegate, D. M. and Dellar, P. J. and Howell, P. D. and Bain, C. D. (2012) A new pathway for the re-equilibration of micellar
surfactant solutions.
Soft Matter . (Submitted)

Griffiths, I. M. and Howell, P. D. and Shipley, R. J. (2012) Control and optimization of solute transport in a porous tube. Physics of Fluids . (Submitted)

Griffiths, I. M. and Stone, H. A. (2012) Axial Dispersion via Shear-enhanced Diffusion in Colloidal
Suspensions.
Europhysics Letters . (Submitted)

Guettel, Stefan (2012) Rational Krylov approximation of matrix functions: Numerical methods and optimal pole selection. Technical Report. Wiley. (Submitted)

Guettel, Stefan and Klein, Georges (2012) Convergence of linear barycentric rational interpolation for analytic functions. Technical Report. Unspecified. (Submitted)

Guettel, Stefan and Knizhnerman, Leonid (2012) A black-box rational Arnoldi variant for Cauchy-Stieltjes matrix functions. Technical Report. SIAM. (Submitted)

Guettel, Stefan and Pestana, Jennifer (2012) Some observations on weighted GMRES. Technical Report. Unspecified. (Submitted)

Hadjimichael, Y. and Macdonald, C. B. and Ketcheson, D. I. and Verner, J. H. (2012) Effective order strong stability preserving Runge–Kutta methods. SIAM Journal on Numerical Analysis . (Submitted)

Hale, N. and Townsend, A. (2012) Fast and Accurate Computation of Gauss-Legendre and
Gauss-Jacobi Quadrature Nodes and Weights.
SIAM Journal on Scientific Computing . (Submitted)

Hale, Nicholas and Townsend, Alex (2012) Fast and accurate computation of Gauss-Legendre and Gauss-Jacobi quadrature nodes and weights. Technical Report. Unspecified. (Submitted)

Hale, Nicholas and Trefethen, Lloyd N. (2012) Chebfun and numerical quadrature. Technical Report. Science in China A. (Submitted)

Hale, Nicholas and Trefethen, Lloyd N. (2012) Chebfun and Numerical Quadrature. Science in China Mathematics Series A . (Submitted)

Hauser, Raphael and Matzinger, Heinrich (2012) Distribution of Aligned Letter Pairs in Optimal Alignments of Random Sequences. Technical Report. Annals of Probability. (Submitted)

Heath-Brown, D. R. (2012) Square-free values of $n^2+1$. Acta Arithmetica, 155 . pp. 1-13. ISSN 0065-1036

Heath-Brown, D. R. and Browning, T. D. (2012) Quadratic polynomials represented by norm forms. Geom. Funct. Anal., 22 . pp. 1124-1190.

Heath-Brown, D. R. and Pierce, L.B. (2012) Counting rational points on smooth cyclic covers. J. Number Theory, 132 . pp. 1741-1757.

Heaton, L L M and Lopez, E and Maini, P. K. and Fricker, M D and Jones, N S (2012) Advection, diffusion, and delivery over a network. Physical Review E, 86 (2). 021905-1-021905-10.

Huang, Di (2012) On Root's Barriers and Their Applications in Robust Pricing and Hedging of Variance Options. Masters thesis, University of Oxford.

Hubbard, M. E. and Byrne, H. M. (2012) Multiphase modelling of vascular tumour growth in two spatial dimensions. Journal of Theoretical Biology . (Submitted)

Ioio, I D and Galinha, C and Fletcher, A G and Grigg, S P and Molnar, A and Willemsen, V and Scheres, B and Maini, P. K. and Tsiantis, M (2012) A PHABULOSA/cytokinin feedback loop controls root growth in arabidopsis. Current Biology, 22 (18). pp. 1699-1704.

Jain, H. V. and Byrne, H. M. (2012) Qualitative Analysis of an Integro-Differential Equation Model of Periodic Chemotherapy. Applied Maths Letters . (Submitted)

Jain, H. V. and Moldovan, N. I. and Byrne, H. M. (2012) Modeling Stem/Progenitor Cell-Induced Neovascularization and
Oxygenation around Solid Implants.
Tissue Engineering Part C . (Submitted)

Jain, H. V. and Richardson, A. and Meyer-Hermann, M. E. and Byrne, H. M. (2012) Exploiting the synergy between carboplatin and ABT-737 in the treatment of ovarian carcinomas. Cancer Research . (Submitted)

Kelly, S and Kramer, S and Schwede, A and Maini, P. K. and Gull, K and Carrington, M (2012) Genome organization is a major component of gene expression control in response to stress and during the cell division cycle in trypanosomes. Open Biology, 2 . p. 120033.

Kershaw, S. K. and Byrne, H. M. and Gavaghan, D. J. and Osborne, J. M. (2012) Colorectal Cancer Through Simulation and Experiment. IET Systems Biology . (Submitted)

Klika, V and Baker, R. E. and Headon, D and Gaffney, E. A. (2012) The influence of receptor-mediated interactions on reaction-diffusion mechanisms of cellular self-organisation. Bulletin of Mathematical Biology, 74 (4). pp. 935-957.

Klingbeil, G. and Erban, R. and Giles, M. B. and Maini, P. K. (2012) Fat versus thin threading approach on GPUs: application to stochastic simulation of chemical reactions. IEEE Transactions on Parallel & Distributed Systems, 23 (2). pp. 280-287.

Knox, D. J. and Wilson, S. K. and Duffy, B. R. and McKee, S. (2012) Squeeze-Film Flow in the Presence of a Thin Porous Bed, with Application to the Human Knee Joint. SIAM Journal on Applied Mathematics . (Submitted)

Krkošek, M. and Ashander, J. and Lewis, M. A. (2012) Parasite spill-back from domestic hosts may induce an Allee effect in wildlife hosts. Proceedings of the Royal Society B . (Submitted)

Krkošek, M. and Connors, B. M. and Lewis, M. A. and Poulin, R. (2012) Allee Effects May Slow the Spread of Parasites in a Coastal Marine Ecosystem. American Naturalist . (Submitted)

Leslie, G. A. and Wilson, S. K. and Duffy, B. R. (2012) Thermoviscous Coating and Rimming Flow. The Quarterly Journal of Mechanics and Applied Mathematics . (Submitted)

Leslie, G. A. and Wilson, S. K. and Duffy, B. R. (2012) Three-dimensional coating and rimming flow: a ring of fluid on a rotating horizontal cylinder. Journal of Fluid Mechanics . (Submitted)

Lewis, A C F and Jones, N S and Porter, M A and Deane, C M (2012) What evidence is there for the homology of protein-protein interactions? PLOS Computational Biology, 8 (9). e1002645.

Lewis, M. A. and Li, B. (2012) Spreading Speed, Traveling Waves, and Minimal Domain Size in
Impulsive Reaction-diffusion Models.
Bulletin of Mathematical Biology . (Submitted)

Lovrics, A. and Yu, G. and Juhász, B. and Bock, I. and Byrne, H. M. and Dinnyés, A. and Kovács, K. A. (2012) Boolean modelling reveals new regulatory connections between transcription factors orchestrating the development of the ventral spinal cord. Journal of the Royal Society Interface . (Submitted)

Ma, Q and Nicolau jr, D. V. and Maini, P. K. and Berry, R M and Bai, F (2012) Conformational spread in the flagellar motor switch: a model study. PLOS Computational Biology, 8 (5). pp. 1-16.

Maclaren, O J and Sneyd, J. S. and Crampin, E J (2012) Efficiency of primary saliva secretion: an analysis of parameter dependence in dynamic single-cell and acinus models, with application to aquaporin knockout studies. Journal of Membrane Biology, 245 (1). pp. 29-50.

Maini, P. K. (2012) Foreward. Computers and Mathematics with Applications, 64 (3). p. 163. ISSN 0898-1221

Maini, P. K. (2012) Turing's mathematical theory of morphogenesis. Asia Pacific Mathematics Newsletter, 2 (1). pp. 7-8. ISSN ISSN 2010-3492 ISSN 2010-3492

Maini, P. K. and Woolley, T. E. and Baker, R. E. and Gaffney, E. A. and Seirin Lee, S (2012) Turing's model for biological pattern formation and the robustness problem. Interface Focus, 2 (4). pp. 487-496.

Majumdar, A. (2012) The Mathematics of Liquid Crystals: Analysis, Computation and Applications. BLCS Newsletter 2012 . (Submitted)

Majumdar, A. and Goriely, A. (2012) Static and dynamic stability results for a class of three-dimensional configurations of Kirchhoff elastic rods. Physica D . (Submitted)

Majumdar, A. and Ockendon, J. R. and Howell, P. D. and Surovyatkina, E. (2012) Transitions through Critical Temperatures in Nematic Liquid Crystals. Physical Review E . (Submitted)

Majumdar, A. and Pisante, A. and Henao, D. (2012) Biaxial defect cores in nematic equilibria an asymptotic result. Physical Review Letters . (Submitted)

Martin, N K and Robey, I F and Gaffney, E. A. and Gatenby, R. A. and Maini, P. K. (2012) Predicting the safety and efficacy of butter therapy to raise tumour pHe: an integrative modelling study. British Journal of Cancer, 106 (7). pp. 1280-1287. ISSN 0007-0920

März, T. and Macdonald, C. B. (2012) Calculus on surfaces with general closest point functions. SIAM Journal on Numerical Analysis . (Submitted)

McArdle, C. R. and Pritchard, D. and Wilson, S. K. (2012) The Stokes boundary layer for a thixotropic or antithixotropic fluid. Journal of Non-Newtonian Fluid Mechanics . (Submitted)

Mcgillen, J B and Martin, N K and Robey, I F and Gaffney, E. A. and Maini, P. K. (2012) Applications of mathematical analysis to tumour acidity modelling. RIMS Kokyuroku Bessatsu, B31 . pp. 31-59.

McKenzie, H. W. and Merrill, E. H. and Spiteri, R. J. and Lewis, M. A. (2012) How linear features alter predator movement and the functional
response.
Journal of the Royal Society Interface Focus . (Submitted)

McLennan, R and Dyson, L and Prather, K W and Morrison, J A and Baker, R. E. and Maini, P. K. and Kulesa, P. M. (2012) Multiscale mechanisms of cell migration during development: theory and experiment. Development, 139 (16). pp. 2935-2944.

McNamara, H. (2012) An estimate of energy dissipation due to soil-moisture hysteresis. Water Resources Research . (Submitted)

Melnik, A. V. and Goriely, A. (2012) Dynamics of mechanically induced fiber reorientation in
the material reinforced by two families of fibers.
Mathematics and Mechanics of Solids . (Submitted)

Menon, S. N. and Hall, C. L. and McCue, S. W. and McElwain, D. L. S. (2012) A model for one-dimensional morphoelasticity and its application to fibroblast-populated collagen lattices. Journal of Mathematical Biology . (Submitted)

Mirams, G R and Fletcher, A G and Maini, P. K. and Byrne, H. M. (2012) A theoretical investigation of the effect of proliferation & adhesion on monoclonal conversion in the colonic crypt. Journal of Theoretical Biology, 312 (2). pp. 143-156.

Mirams, G R and Fletcher, A G and Maini, P. K. and Byrne, H. M. (2012) A theoretical investigation of the effect of proliferation and
adhesion on monoclonal conversion in the colonic crypt.
Journal of Theoretical Biology . (Submitted)

Moore, M. R. and Howison, S. D. and Ockendon, J. R. and Oliver, J. M. (2012) A note on oblique water entry. Journal of Engineering Maths . (Submitted)

Moore, M. R. and Howison, S. D. and Ockendon, J. R. and Oliver, J. M. (2012) Three-dimensional oblique water-entry problems at small
deadrise angles.
Journal of Fluid Mechanics . (Submitted)

Moore, M. R. and Ockendon, J. R. and Oliver, J. M. (2012) Air-cushioning in impact problems. IMA Journal of Applied Mathematics . (Submitted)

Morgan, C. E. and Breward, C. J. W. and Griffiths, I. M. and Howell, P. D. and Penfold, J. and Thomas, R. K. and Tucker, I. and Petkov, J. T. and Webster, J. R. P. (2012) The kinetics of surfactant desorption at the air–solution interface. Langmuir . (Submitted)

Moulton, D. E. and Goriely, A. and Chirat, R. (2012) Mechanical growth and morphogenesis of seashells. Proceedings of the National Academy of Sciences . (Submitted)

Moulton, D. E. and Lega, J. (2012) Effect of disjoining pressure in a thin film equation with
non-uniform forcing.
European Journal of Applied Mathematics . (Submitted)

Moulton, D. E. and Lessinnes, T. and Goriely, A. (2012) Morphoelastic rods Part 1: A single growing elastic rod. Journal of the Mechanics and Physics of Solids . (Submitted)

Muraro, D. and Byrne, H. M. and King, J. R. and Bennett, M. J. (2012) Mathematical modelling plant signalling networks. Mathematical Modelling of Natural Phenomena . (Submitted)

Muraro, D. and Voß, U. and Wilson, M. and Bennett, M. and Byrne, H. M. and de Smet, I. and Hodgman, C. and King, J. R. (2012) Inference of the genetic network regulating lateral root initiation in Arabidopsis thaliana. Transactions on Computational Biology and Bioinformatics . (Submitted)

Murphy, K. E. and Hall, C. L. and Maini, P. K. and McCue, S. W. and D L Sean, McElwain (2012) A fibrocontractive mechanochemical model of dermal wound closure incorporating realistic growth factor kinetics. Bulletin of Mathematical Biology, 74 (5). pp. 1143-1170. ISSN 0092-8240

Murray, P J and Edwards, C. M. and Tindall, M. J. and Maini, P. K. (2012) Classifying general nonlinear force laws in cell-based models via the continuum limit. Physical Review E, 85 (2). 021921-(11 pages). ISSN 1063-651X

Murray, P J and Maini, P. K. and Plikus, M. V. and Chuong, C. M. and Baker, R. E. (2012) Modelling hair follicle growth dynamics as an excitable medium. PLOs Computational Biology, 8 (12). e1002804-(19 pages).

O'Dea, R. D. and Osborne, J. M. and El Haj, A. J. and Byrne, H. M. and Waters, S. L. (2012) The interplay between tissue growth and scaffold degradation in engineered tissue constructs. Journal of Mathematical Biology . (Submitted)

Olver, Sheehan and Townsend, Alex (2012) A fast and well-conditioned spectral method. Technical Report. SIAM Review. (Submitted)

Onnela, J P and Fenn, D J and Reid, S and Porter, M A and Mucha, P J and Fricker, M D and Jones, N S (2012) Taxonomies of networks from community structure. Physical Review E, 86 (3). 036104.

Paetsch, C. and Dorfmann, L. (2012) Non-linear modeling of active biohybrid materials. Journal of Nonlinear Mechanics . (Submitted)

Palk, L and Sneyd, J. S. and Patterson, K and Shuttleworth, T J and Yule, D I and Maclaren, O J and Crampin, E J (2012) Modelling the effects of calcium waves and oscillations on saliva secretion. Journal of Theoretical Biology, 305 . pp. 45-53.

Pancheri, F. and Dorfmann, L. (2012) Strain controlled biaxial stretch: An experimental characterization of natural rubber. Rubber Chemistry and Technology . (Submitted)

Paterson, C. and Wilson, S. K. and Duffy, B. R. (2012) Gravity-driven draining of a thin rivulet with constant width down a slowly varying substrate. European Journal of Mechanics - B/Fluids . (Submitted)

Pearson, John W. and Stoll, Martin (2012) Fast iterative solution of reaction-diffusion control problems arising from chemical processes. Technical Report. SIAM. (Submitted)

Pearson, John W. and Stoll, Martin and Wathen, A. J. (2012) Preconditioners for state constrained optimal control problems with Moreau-Yosida penalty function. Technical Report. Wiley. (Submitted)

Pearson, John W. and Stoll, Martin and Wathen, A. J. (2012) Robust Iterative Solution of a Class of Time-Dependent Optimal Control Problems. Technical Report. Wiley. (Submitted)

Peppin, S. S. L. and Style, R. W. (2012) The physics of frost heave and ice-lens growth. Vadose Zone Journal . (Submitted)

Pineau, Fabrice (2012) Self-referential options and linear stability. Masters thesis, University of Oxford.

Piret, C. (2012) The Orthogonal Gradients Method: a Radial Basis Functions Method for Solving Partial Differential Equations on Arbitrary Surfaces. Journal of Computational Physics .

Potapov, A. and Merrill, E. H. and Lewis, M. A. (2012) Wildlife disease elimination and 1 density dependence. Proceedings of the Royal Society B . (Submitted)

Prior, C. and Goriely, A. (2012) The Fourier transform of tubular densities. Journal of Physics A: Mathematical and General . (Submitted)

Reis, T. and Dellar, P. J. (2012) Moment-based formulation of Navier–Maxwell slip boundary conditions for lattice Boltzmann simulations of rarefied flows in microchannels. Physics of Fluids . (Submitted)

Reis, T. and Wilson, H. J. (2012) Rolie-Poly fluid flowing through constrictions: Two distinct
instabilities.
Journal of Non-Newtonian Fluid Mechanics . (Submitted)

Renaut, Rosemary and Zhu, Shengxin (2012) Application of Fredholm integral equations inverse theory to the radial basis function approximation problem. Technical Report. Unspecified. (Submitted)

Richardson, Mark (2012) Chebyshev interpolation for functions with endpoint singularities via exponential and double-exponential transforms. Technical Report. SINUM. (Submitted)

Rockstroh, P. and März, T. and Ruuth, S. J. (2012) An embedding technique for the solution of reaction-fiffusion equations on algebraic surfaces with isolated singularities. Foundations of Computational Mathematics . (Submitted)

Romanovski, Ivan (2012) Time consistency in Risk measures. Masters thesis, University of Oxford.

Séguis, J. - C. and Burrage, K. and Erban, R. and Kay, D. (2012) Simulation of cell movement through evolving environment: a fictitious domain approach. Journal of Computational Physics . (Submitted)

Scianna, M. and Bell, C. G. and Preziosi, L. (2012) A Review of Mathematical Models for the Formation of
Vascular Networks.
Annals of Biomedical Engineering . (Submitted)

Scott, J G (2012) Phase i trialist. The Lancet Oncology, 13 (3). p. 236.

Scott, J G and Kuhn, P and Anderson, A R A (2012) Unifying metastasis--Integrating intravasation, circulation and end organ colonization. Nature Reviews Cancer, 12 (7). p. 445.

Shikhmurzaev, Y. D. and Sprittles, J. E. (2012) On the anomalous dynamics of capillary rise in porous media. Physical Review E .

Shvartsman, S Y and Baker, R. E. (2012) Mathematical models of morphogen gradients and their effects on gene expression. Wires Developmental Biology .

Smears, Iain and Suli, Endre (2012) Discontinuous Galerkin finite element approximation of non-divergence form elliptic equations with Cordes coefficients. Technical Report. Unspecified. (Submitted)

Smith, A M and Baker, R. E. and Kay, D. and Maini, P. K. (2012) Incorporating chemical signalling factors into cell-based models of growing epithelial tissues. Journal of Mathematical Biology, 65 (3). pp. 441-463.

Song, Tianchi (2012) Optimal Stopping with Behavioral Objective. Masters thesis, University of Oxford.

Soulaine, C. and Davit, Y. and Quintard, M. (2012) A two-pressure model for slightly compressible single phase flow in bi-structured porous media. Chemical Engineering Science . (Submitted)

Sprittles, J. E. and Shikhmurzaev, Y. D. (2012) Coalescence of Liquid Drops: Different Models Versus
Experiment.
Physics of Fluids . (Submitted)

Sprittles, J. E. and Shikhmurzaev, Y. D. (2012) The Dynamics of Liquid Drops and their Interaction with
Solids of Varying Wettabilities.
Physics of Fluids . (Submitted)

Sprittles, J. E. and Shikhmurzaev, Y. D. (2012) Finite Element Simulation of Dynamic Wetting Flows as an
Interface Formation Process.
Journal of Computational Physics . (Submitted)

Stoye, S and Porter, M A and Dawkins, M S (2012) Synchronized lying in cattle in relation to time of day. Livestock Science, 149 (1-2). pp. 70-73.

Sullivan, J. M. and Paterson, C. and Wilson, S. K. and Duffy, B. R. (2012) A thin rivulet or ridge subject to a uniform transverse
shear stress at its free surface due to an external airflow.
Physics of Fluids . (Submitted)

Taroni, M. and Breward, C. J. W. and Cummings, L. J. and Griffiths, I. M. (2012) Asymptotic solutions of glass temperature profiles during steady optical fibre drawing. Journal of Engineering Mathematics . (Submitted)

Taroni, M. and Breward, C. J. W. and Howell, P. D. and Oliver, J. M. (2012) Boundary conditions for free surface inlet and outlet
problems.
Journal of Fluid Mechanics . (Submitted)

Taroni, M. and Vella, D. (2012) Multiple equilibria in a simple elastocapillary system. Journal of Fluid Mechanics . (Submitted)

Tavener, S. J. and Wildey, T. (2012) Adjoint based a posteriori analysis of multiscale mortar discretizations with multinumerics. SIAM Journal on Scientific Computing . (Submitted)

Thompson, R and Yates, C. A. and Baker, R. E. (2012) Modelling cell migration and adhesion during development. Bulletin of Mathematical Biology, 74 (12). pp. 2793-2809.

Tindall, M. J. and Dyson, L and Smallbone, K. and Maini, P. K. (2012) Modelling acidosis and the cell cycle in multicellular tumour spheroids. Journal of Theoretical Biology, 298 (1). pp. 107-115.

Tindall, M. J. and Gaffney, E. A. and Maini, P. K. and Armitage, J. P. (2012) Theoretical insights into bacterial chemotaxis. WIREs System Biology Med, 4 (3). pp. 247-259.

Townsend, Alex and Noferini, Vanni and Nakatsukasa, Yuji (2012) Vector spaces of linearizations for matrix polynomials: A bivariate polynomial approach. Technical Report. SIMAX. (Submitted)

Trichas, G and Smith, A M and White, N and Wilkins, V and Watanabe, T and Moore, A and Joyce, B and Sugnaseelan, J and Rodriguez, T A and Kay, David and Baker, R. E. and Maini, P. K. and Srinivas, S (2012) Multi-cellular Rosettes in the mouse visceral endoderm facilitate the ordered migration of anterior visceral endoderm cells. PLos Biology, 10 (2). pp. 1-14.

Tsai, S. S. H. and Griffiths, I. M. and Stone, H. A. (2012) Microfluidic immunomagnetic multi-target sorting – a model for controlling deflection of paramagnetic beads. Lab on a Chip, 11 (15). pp. 2577-2582.

Vella, D. and Ajdari, A. and Vaziri, A. and Boudaoud, A. (2012) Indentation of ellipsoidal and cylindrical elastic shells. Physical Review Letters . (Submitted)

Verhaegen, P D H M and Van Marle, J and Kuehne, A and Schouten, H J and Gaffney, E. A. and Maini, P. K. and Middlelkoop, E and Van Zuijlen, P P M (2012) Collagen bundle morphometry in skin & scar tissue: a novel distance mapping method provides superior measurements compared to Fourier analysis. Journal of Microscopy, 245 (1). pp. 82-89.

Vigolo, D. and Griffiths, I. M. and Radl, S. and Stone, H. A. (2012) An experimental and theoretical investigation of particle–wall impacts in a T-junction. Journal of Fluid Mechanics . (Submitted)

Wagner, T. J. W. and Vella, D. (2012) The ‘Sticky Elastica’: Delamination blisters beyond small
deformations.
Soft Matter .

Wagner, T. J. W. and Vella, D. (2012) The sensitivity of Graphene ‘Snap-through’ to substrate
geometry.
Applied Physics Letters .

Wake, G. C. and Byrne, H. M. (2012) Calculus from the past: multiple delay systems arising in cancer cell modelling. ANZIAM Journal . (Submitted)

Wathen, A. J. and Zhu, S.-X. (2012) On the spectral distribution of kernel matrices related to
radial basis functions.
Numerische Mathematik . (Submitted)

Webber, M. and Bressloff, P. C. (2012) The effects of noise on binocular rivalry waves: a stochastic neural field model. Journal of Statistical Mechanics . (Submitted)

Wheeler, J. D. and Bampfylde, C. J. and Lewis, M. A. (2012) Modelling temperature-dependent larval development and
subsequent demographic Allee effects in adult populations of the alpine butterfly Parnassius smintheus.
Theoretical Ecology . (Submitted)

White, S M and Burden, J P and Maini, P. K. and Hails, R S (2012) Modelling the within-host growth of viral infections in insects. Journal of Theoretical Biology, 312 (7). pp. 34-43.

Whiteley, J. P. and Tavener, S. J. (2012) Error estimation and adaptivity for incompressible, non–linear (hyper–)elasticity. Computer Methods in Applied Mechanics and Engineering . (Submitted)

Wood, T and Yates, C A and Wilkinson, D and Rosser, G (2012) Simplified multitarget tracking using the PHD filter for microscopic video data. IEE Transactions on Circuits and Systems for Video Technology, 22 (5). pp. 702-713.

Woolley, T. E. and Baker, R. E. and Gaffney, E. A. and Maini, P. K. and Seirin Lee, S (2012) Effects of intrinsic stochasticity on delayed reaction-diffusion patterning systems. Physical Review E, 85 (5). 051914-1-051914-14. ISSN 1539-3755

Wu, Zhemin (2012) Pricing American Options using Monte Carlo Method. Masters thesis, University of Oxford.

Wymbs, N F and Bassett, D S and Mucha, P J and Porter, M A and Grafton, S T (2012) Differential recruitment of the sensorimotor putamen and frontoparietal cortex during motor chunking in humans. Neuron, 74 (5). pp. 936-946.

Yates, C. A. and Baker, R. E. and Erban, R. and Maini, P. K. (2012) Going from microscopic to macroscopic on nonuniform growing domains. Physical Review E, 86 (2). 021921-1-02921-20.

Zhang, Chaoyan (2012) Robust Hedging of Variance Swaps: Discrete Sampling & Co-maturing European Options. Masters thesis, University of Oxford.

Zhang, Yunxian (2012) Market Models in Stochastic Portfolio Theory. Masters thesis, University of Oxford.

Zhu, S. (2012) Compactly supported radial basis functions: how and why? SIAM Review . (Submitted)

Zhu, S. -X. and Gu, T. -X. and Liu, X. -P. (2012) Inner product computation for sparse iterative solvers on
distributed supercomputer.
Parallel Computing . (Submitted)

Zhu, Shengxin (2012) Compactly supported radial basis functions: How and why? Technical Report. SIAM. (Submitted)

This list was generated on Wed Jul 30 15:11:15 2014 BST.