The Mathematical Institute, University of Oxford, Eprints Archive

Items where Research Group is "Centre for Mathematical Biology" and Year is 2012

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Number of items: 45.

Al-Shammari, A A and Gaffney, E. A. and Egginton, S (2012) Re-evaluating the use of voronoi tessellations in the assessment of oxygen supply from capillaries in muscle. Bulletin of Mathematical Biology, 74 (9). pp. 2204-2231.

A

Aragón, J. L. and Barrio, R. A. and Woolley, T. E. and Baker, R. E. and Maini, P. K. (2012) Nonlinear effects on Turing patterns: time oscillations and chaos. Physical Review E, 86 (2). 026201-1. ISSN 1063-651X

B

Baker, R. E. and Simpson, M J (2012) Models of collective cell motion for cell populations with different aspect ratio: diffusion, proliferation & travelling waves. Physica A, 391 (14). pp. 3729-3750.

Barry Cooper, S and Maini, P. K. (2012) The mathematics of nature at the Alan Turing centenary. Interface Focus, 2 . pp. 393-396.

Basanta, D and Scott, J G and Fishman, M N and Ayala, G and Hayward, S W and Anderson, A R A (2012) Investigating prostate cancer tumour-stroma interactions - clinical and biological insights from an evolutionary game. British Journal of Cancer, 106 (1). pp. 174-181. ISSN 0007-0920

C

Collins-Hooper, H. and Woolley, T. E. and Dyson, L and Patel, A. and Potter, P. and Baker, R. E. and Gaffney, E. A. and Maini, P. K. and Dash, P. R. and Patel, K. (2012) Age-related changes in speed & mechanism of adult skeletal muscle stem cell migration. Stem Cells, 30 (6). pp. 1182-1195.

Connor, A. J. and Cooper, J and Byrne, H. M. and Maini, P. K. and McKeever, S. (2012) Object-oriented paradigms for modelling vascular tumor growth: a case study. In: The Fourth International Conference on Advances in Systems Simulation. Simul 2012 . Iaria, Lisbon, pp. 74-83.

D

Dunn, S J and Fletcher, A G and Chapman, S. J. and Gavaghan, D. J. and Osborne, J. M. (2012) Modelling the role of the basement membrane beneath a growing epithelial monolayer. Journal of Theoretical Biology, 298 (1). pp. 82-91.

Dyson, L and Maini, P. K. and Baker, R. E. (2012) Macroscopic limits of individual-based models for motile cell populations with volume exclusion. Physical Review E, 86 (3). 031903-1-031903-5.

F

Fletcher, A G and Breward, C. J. W. and Chapman, S. J. (2012) Mathematical modeling of monoclonal conversion in the colonic crypt. Journal of Theoretical Biology, 300 (1). pp. 118-133.

G

Gilmore, S J and Vaughan, B J and Madzvamuse, A. and Maini, P. K. (2012) A mechanochemical model of striae distensae. Mathematical Biosciences, 240 (2). pp. 141-147.

H

Heaton, L L M and Lopez, E and Maini, P. K. and Fricker, M D and Jones, N S (2012) Advection, diffusion, and delivery over a network. Physical Review E, 86 (2). 021905-1-021905-10.

I

Ioio, I D and Galinha, C and Fletcher, A G and Grigg, S P and Molnar, A and Willemsen, V and Scheres, B and Maini, P. K. and Tsiantis, M (2012) A PHABULOSA/cytokinin feedback loop controls root growth in arabidopsis. Current Biology, 22 (18). pp. 1699-1704.

K

Kelly, S and Kramer, S and Schwede, A and Maini, P. K. and Gull, K and Carrington, M (2012) Genome organization is a major component of gene expression control in response to stress and during the cell division cycle in trypanosomes. Open Biology, 2 . p. 120033.

Klika, V and Baker, R. E. and Headon, D and Gaffney, E. A. (2012) The influence of receptor-mediated interactions on reaction-diffusion mechanisms of cellular self-organisation. Bulletin of Mathematical Biology, 74 (4). pp. 935-957.

L

Lewis, A C F and Jones, N S and Porter, M A and Deane, C M (2012) What evidence is there for the homology of protein-protein interactions? PLOS Computational Biology, 8 (9). e1002645.

M

Ma, Q and Nicolau jr, D. V. and Maini, P. K. and Berry, R M and Bai, F (2012) Conformational spread in the flagellar motor switch: a model study. PLOS Computational Biology, 8 (5). pp. 1-16.

Maclaren, O J and Sneyd, J. S. and Crampin, E J (2012) Efficiency of primary saliva secretion: an analysis of parameter dependence in dynamic single-cell and acinus models, with application to aquaporin knockout studies. Journal of Membrane Biology, 245 (1). pp. 29-50.

Maini, P. K. (2012) Foreward. Computers and Mathematics with Applications, 64 (3). p. 163. ISSN 0898-1221

Maini, P. K. (2012) Turing's mathematical theory of morphogenesis. Asia Pacific Mathematics Newsletter, 2 (1). pp. 7-8. ISSN ISSN 2010-3492 ISSN 2010-3492

Maini, P. K. and Woolley, T. E. and Baker, R. E. and Gaffney, E. A. and Seirin Lee, S (2012) Turing's model for biological pattern formation and the robustness problem. Interface Focus, 2 (4). pp. 487-496.

Martin, N K and Robey, I F and Gaffney, E. A. and Gatenby, R. A. and Maini, P. K. (2012) Predicting the safety and efficacy of butter therapy to raise tumour pHe: an integrative modelling study. British Journal of Cancer, 106 (7). pp. 1280-1287. ISSN 0007-0920

Mcgillen, J B and Martin, N K and Robey, I F and Gaffney, E. A. and Maini, P. K. (2012) Applications of mathematical analysis to tumour acidity modelling. RIMS Kokyuroku Bessatsu, B31 . pp. 31-59.

McLennan, R and Dyson, L and Prather, K W and Morrison, J A and Baker, R. E. and Maini, P. K. and Kulesa, P. M. (2012) Multiscale mechanisms of cell migration during development: theory and experiment. Development, 139 (16). pp. 2935-2944.

Mirams, G R and Fletcher, A G and Maini, P. K. and Byrne, H. M. (2012) A theoretical investigation of the effect of proliferation & adhesion on monoclonal conversion in the colonic crypt. Journal of Theoretical Biology, 312 (2). pp. 143-156.

Murphy, K. E. and Hall, C. L. and Maini, P. K. and McCue, S. W. and D L Sean, McElwain (2012) A fibrocontractive mechanochemical model of dermal wound closure incorporating realistic growth factor kinetics. Bulletin of Mathematical Biology, 74 (5). pp. 1143-1170. ISSN 0092-8240

Murray, P J and Edwards, C. M. and Tindall, M. J. and Maini, P. K. (2012) Classifying general nonlinear force laws in cell-based models via the continuum limit. Physical Review E, 85 (2). 021921-(11 pages). ISSN 1063-651X

Murray, P J and Maini, P. K. and Plikus, M. V. and Chuong, C. M. and Baker, R. E. (2012) Modelling hair follicle growth dynamics as an excitable medium. PLOs Computational Biology, 8 (12). e1002804-(19 pages).

O

Onnela, J P and Fenn, D J and Reid, S and Porter, M A and Mucha, P J and Fricker, M D and Jones, N S (2012) Taxonomies of networks from community structure. Physical Review E, 86 (3). 036104.

P

Palk, L and Sneyd, J. S. and Patterson, K and Shuttleworth, T J and Yule, D I and Maclaren, O J and Crampin, E J (2012) Modelling the effects of calcium waves and oscillations on saliva secretion. Journal of Theoretical Biology, 305 . pp. 45-53.

S

Scott, J G (2012) Phase i trialist. The Lancet Oncology, 13 (3). p. 236.

Scott, J G and Kuhn, P and Anderson, A R A (2012) Unifying metastasis--Integrating intravasation, circulation and end organ colonization. Nature Reviews Cancer, 12 (7). p. 445.

Shvartsman, S Y and Baker, R. E. (2012) Mathematical models of morphogen gradients and their effects on gene expression. Wires Developmental Biology .

Smith, A M and Baker, R. E. and Kay, D. and Maini, P. K. (2012) Incorporating chemical signalling factors into cell-based models of growing epithelial tissues. Journal of Mathematical Biology, 65 (3). pp. 441-463.

Stoye, S and Porter, M A and Dawkins, M S (2012) Synchronized lying in cattle in relation to time of day. Livestock Science, 149 (1-2). pp. 70-73.

T

Thompson, R and Yates, C. A. and Baker, R. E. (2012) Modelling cell migration and adhesion during development. Bulletin of Mathematical Biology, 74 (12). pp. 2793-2809.

Tindall, M. J. and Dyson, L and Smallbone, K. and Maini, P. K. (2012) Modelling acidosis and the cell cycle in multicellular tumour spheroids. Journal of Theoretical Biology, 298 (1). pp. 107-115.

Tindall, M. J. and Gaffney, E. A. and Maini, P. K. and Armitage, J. P. (2012) Theoretical insights into bacterial chemotaxis. WIREs System Biology Med, 4 (3). pp. 247-259.

Trichas, G and Smith, A M and White, N and Wilkins, V and Watanabe, T and Moore, A and Joyce, B and Sugnaseelan, J and Rodriguez, T A and Kay, David and Baker, R. E. and Maini, P. K. and Srinivas, S (2012) Multi-cellular Rosettes in the mouse visceral endoderm facilitate the ordered migration of anterior visceral endoderm cells. PLos Biology, 10 (2). pp. 1-14.

V

Verhaegen, P D H M and Van Marle, J and Kuehne, A and Schouten, H J and Gaffney, E. A. and Maini, P. K. and Middlelkoop, E and Van Zuijlen, P P M (2012) Collagen bundle morphometry in skin & scar tissue: a novel distance mapping method provides superior measurements compared to Fourier analysis. Journal of Microscopy, 245 (1). pp. 82-89.

W

White, S M and Burden, J P and Maini, P. K. and Hails, R S (2012) Modelling the within-host growth of viral infections in insects. Journal of Theoretical Biology, 312 (7). pp. 34-43.

Wood, T and Yates, C A and Wilkinson, D and Rosser, G (2012) Simplified multitarget tracking using the PHD filter for microscopic video data. IEE Transactions on Circuits and Systems for Video Technology, 22 (5). pp. 702-713.

Woolley, T. E. and Baker, R. E. and Gaffney, E. A. and Maini, P. K. and Seirin Lee, S (2012) Effects of intrinsic stochasticity on delayed reaction-diffusion patterning systems. Physical Review E, 85 (5). 051914-1-051914-14. ISSN 1539-3755

Wymbs, N F and Bassett, D S and Mucha, P J and Porter, M A and Grafton, S T (2012) Differential recruitment of the sensorimotor putamen and frontoparietal cortex during motor chunking in humans. Neuron, 74 (5). pp. 936-946.

Y

Yates, C. A. and Baker, R. E. and Erban, R. and Maini, P. K. (2012) Going from microscopic to macroscopic on nonuniform growing domains. Physical Review E, 86 (2). 021921-1-02921-20.

This list was generated on Wed Sep 3 02:12:45 2014 BST.