The Mathematical Institute, University of Oxford, Eprints Archive

Items where Research Group is "Centre for Mathematical Biology" and Year is 2011

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Number of items: 24.

Article

Bassett, D S and Wymbs, N F and Porter, M A and Mucha, P J and Carlson, J M and Grafton , S T (2011) Dynamic reconfiguration of human brain networks during learning. Proceedings of the National Academy of Sciences of the USA, 118 (18). pp. 7641-7646.

Boston, E A J and Gaffney, E. A. (2011) The influence of toxicity constraints in models of chemotherapeutic protocol escalation. Mathematical Medicine & Biology, 28 (4). pp. 357-384.

Bron, A J and Gaffney, E. A. and Tiffany , J M and Yokoi, N (2011) A solute gradient in the tear meniscus I. A hypothesis to explain Marx's line. The Ocular Surface, 9 (2). pp. 70-91.

Bron, A J and Yokoi, N and Gaffney, E. A. and Tiffany , J M (2011) A solute gradient in the tear meniscus II. implications for lid margin disease, including meibomian gland dysfunction. The Ocular Surface, 9 (2). pp. 92-97.

Cho, S W and Kwak, S W and Woolley, T. E. and Lee, M J and Kim, E J and Baker, R. E. and Kim, H J and Shin, J S and Tickle, C and Maini, P. K. and Jung, H S (2011) Interactions between Shh, Sostdc1 and Wnt signaling and a new feedback loop for spatial patterning of the teeth. Development , 138 (9). pp. 1807-1816.

Gaffney, E. A. and Gadelha, H and Smith, D J and Blake, J R and Kirkman-Brown, J C (2011) Mammalian Sperm Motility: Observation and Theory. Annual Review of Fluid Mechanics, 43 (2). pp. 501-528.

Hamadeh, A. and Roberts, M.A.J. and August, E. and McSharry, P. E. and Maini, P. K. and Armitage, J. P. (2011) Feedback control architecture & the bacterial chemotaxis network. PLOS Computational Biology , 7 (5). 15 pages.

Kelly, S and Wickstead, B and Maini, P. K. and Gull, K (2011) Ab initio identification of novel regulatory elements in the genome of Trypanosma brucei by Bayesioan inference on sequence segmentation. PLOs One, 6 (10). e25666 (11 pages).

Klingbeil, G. and Erban, R. and Giles, M. B. and Maini, P. K. (2011) STOCHSIMGPU: parallel stochastic simulation for the sytems biology toolbox 2 for matlab. Bioinformatics, 27 (8). pp. 1170-1171.

MacNamara, S and Baker, R. E. and Maini, P. K. (2011) Distinguishing graded & ultrasensitive signalling cascade kinetics by the shape of morphogen gradients in Drosophila. Journal of Theoretical Biology, 285 (1). pp. 136-146.

Maini, P. K. (2011) Editorial. Bulletin of Mathematical Biology, 73 (1). p. 1. ISSN 0092-8240

Martin, N K and Gaffney, E. A. and Gatenby, R A and Gillies, R. J. and Robey, I F and Maini, P. K. (2011) A mathematical model of tumour & blood pHe regulation: The HCO-3/CO2 buffering system. Mathematical Biosciences, 230 (1). pp. 1-11.

Murray, P J and Walter, A and Fletcher, A G and Edwards, C. M. and Tindall, M. J. and Maini, P. K. (2011) Comparing a discrete and continuum model of the intestinal crypt. Physical Biology, 8 (2). 026011 (11 pages. ISSN 1478-3975

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon, T. and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Plikus, M. V. and Baker, R. E. and Chen, C C and Fare, C and de La Cruz, D. and Andl, T and Maini, P. K. (2011) Self-organizing & stochastic behaviors during the regeneration of hair stem cells. Science, 332 (6029). p. 586.

Schofield, J W and Gaffney, E. A. and Gatenby, R A and Maini, P. K. (2011) Tumour angiogenesis: The gap between theory and experiment. Journal of Theoretical Biology, 274 (1). pp. 97-102.

Simpson, M J and Baker, R. E. (2011) Correcting mean-field approximations for spatially-dependent advection-diffusion-reaction processes. Physical Review E, 82 (4). 041905.

Simpson, M J and Baker, R. E. and McCue, S. W. (2011) Models of collective cell spreading with variable cell aspect ration: a motivation for degenerate diffusion models. Physical Review E, 83 (2). 021901. ISSN 1063-651X

Soto, A M and Sonnenschein, C and Maini, P. K. (2011) Systems biology and cancer, [Editorial]. Progress in Biophysics & Molecular Biology, 106 (2). pp. 337-339.

Sun, J and Bollt, E M and Porter, M A and Dawkins, M S (2011) A mathematical model for the dynamics and synchronization of cows. Physica D, 240 (19). pp. 1497-1509.

Venkatarman, C and Sekimura, T. and Gaffney, E. A. and Maini, P. K. (2011) Modeling parr-mark pattern formation during the early development of Amago trout. Physical Review E, 84 (4). 041923-1-049123-13. ISSN 1063-651X

Woolley, T. E. and Baker, Ruth E. and Gaffney, E. A. and Maini, P. K. (2011) Influence of stochastic domain growth on pattern nucleation for diffusive systems with internal noise. Physical Review E, 84 (4). 041905-1. ISSN 1063-651X

Yates, C. A. and Burrage, K. (2011) Look before you leap: a confidence-based method for selecting species criticality while avoiding negative populations in $\tau$-leaping. The Journal of Chemical Physics, 134 (8). 084109-1.

Conference or Workshop Item

Hamadeh, A. and August, E. and Roberts, M and Maini, P K and Armitage, J P and Ingalls, B and Papachristodoulou, A. (2011) Feedback control architecture of the R. sphaeroides
chemotaxis network.
In: 50th IEEE Conference on Decision and Control and European Control Conference, 12th-15th December 2011, Orlando Florida.

This list was generated on Sat Dec 20 16:12:53 2014 GMT.