Browse by Author

Alarcon, T

Owen, M. R. and Alarcon, T. and Maini, P. K. and Byrne, H. M. (2009) Angiogenesis and vascular remodelling in normal and cancerous tissues. Journal of Mathematical Biology, 58 (4-5). pp. 689-721.

Byrne, H. M. and van Leeuwen, I. M. M. and Owen, M. R. and Alarcon, T. and Maini, P. K. (2008) Multiscale modelling of solid tumour growth. In: Selected Topics in Cancer Modeling. Genesis, Evolution, Immune Competition, & Therapy, n/a (n/a). Birkhauser, Boston, USA, pp. 449-473. ISBN 978-0-8176-4712-4

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Betteridge, R. and Owen, M. R. and Byrne, H. M. and Alarcon, T. and Maini, P. K. (2006) The impact of cell crowding and active cell movement on vascular tumour growth. Networks and Heterogeneous Media, 1 (4). pp. 515-535.

Byrne, H. M. and Owen, M. R. and Alarcon, T. and Murphy, J. and Maini, P. K. (2006) Modelling the response of vascular tumours to chemotherapy: A multiscale approach. Mathematical Models and Methods in Applied Sciences, 16 (7S). pp. 1219-1241.

Byrne, H. M. and Alarcon, T. and Owen, M. R. and Webb, S. D. and Maini, P. K. (2006) Modelling aspects of cancer dynamics: a review. Philosophical Transactions of the Royal Society A, 364 (1843). pp. 1563-1578.

Alarcon, T. and Owen, M. R. and Byrne, H. M. and Maini, P. K. (2006) Multiscale modelling of tumour growth and therapy: the influence of vessel normalisation on chemotherapy. Computational & Mathematical Methods in Medicine, 7 (2-3). pp. 85-119.

Byrne, H. M. and Owen, M. R. and Alarcon, T. and Maini, P. K. (2006) Cancer disease: integrative modelling approaches. 3rd IEEE International Symposium on Biomedical Imaging (1). pp. 806-809.

Alarcon, T. and Byrne, H. M. and Maini, P. K. and Panovska, J. (2006) Mathematical modelling of angiogenesis and vascular adaptation. In, Multidisciplinary Approaches to the Theory of Medicine, R. Paton and L.A. McNamara (eds) Studies in Multidisciplinarity,, 3 . pp. 369-387.

Maini, P. K. and Alarcon, T. and Byrne, H. M. (2006) Modelling aspects of vascular cancer development. Proceedings of the International Symposium on Mathematical and Computational Biology, R.P. Mondaini and R. Dilao (eds), World Scientific . 1 -12.

Byrne, H. M. and Alarcon, T. and Maini, P. K. (2005) Cancer modelling: Getting to the heart of the problem. Journal of Physiology, 561P, SA9 . 4P.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2005) A design principle for vascular beds: the effects of complex blood rheology. Microvascular Research, 69 (3). pp. 156-172.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2005) A multiple scale model for tumor growth. Multiscale Model Simulation, 3 (2). pp. 440-475.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2004) A mathematical model of the effects of hypoxia on the cell-cycle of normal and cancer cells. Journal of theoretical Biology, 229 (3). pp. 395-411.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2004) Towards whole-organ modelling of tumour growth. Progress in Biophysics and Molecular Biology, 85 (2-3). pp. 451-472.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2003) A cellular automaton model for tumour growth in inhomogeneous environment. Journal of Theoretical Biology, 225 (2). pp. 257-274.

Alarcon,, T

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Auffray, C

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Baltrusch, S

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Bernabeu, M

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

Betteridge, R

Betteridge, R. and Owen, M. R. and Byrne, H. M. and Alarcon, T. and Maini, P. K. (2006) The impact of cell crowding and active cell movement on vascular tumour growth. Networks and Heterogeneous Media, 1 (4). pp. 515-535.

Bluthgen, N

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Bodmer, W

van Leeuwen, I. M. M. and Byrne, H. M. and Johnston, M. D. and Edwards, C. M. and Chapman, S. J. and Bodmer, W. F. and Maini, P. K. (2008) Modelling multiscale aspects of colorectal cancer. AIP Conference Proceedings, 971 (1). pp. 3-7.

Bordas, R

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

Breward, C

Breward, C. J. W. and Byrne, H. M. and Lewis, C. E. (2003) A multiphase model describing vascular tumour growth. Bulletin of Mathematical Biology, 65 . pp. 609-640.

Breward, C. J. W. and Byrne, H. M. and Lewis, C. E. (2002) The role of cell-cell interactions in a two-phase model for avascular tumour growth. Journal of Mathematical Biology, 45 (2). pp. 125-152.

Byrne, H

Jain, H. V. and Moldovan, N. I. and Byrne, H. M. (2012) Modeling Stem/Progenitor Cell-Induced Neovascularization and
Oxygenation around Solid Implants. Tissue Engineering Part C . (Submitted)

Jain, H. V. and Byrne, H. M. (2012) Qualitative Analysis of an Integro-Differential Equation Model of Periodic Chemotherapy. Applied Maths Letters . (Submitted)

Davit, Y. and Byrne, H. M. and Osborne, J. M. and Pitt-Francis, J. M. and Gavaghan, D. J. and Quintard, M. (2012) Solute transport within porous biofilms: diffusion or dispersion? Physical Review E . (Submitted)

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and McElwain, D. L. S. and Hutmacher, D. W. (2011) Growth of confined cancer spheroids: a combined experimental and mathematical modelling approach. Integrative Biology . (Submitted)

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Flegg, J. A. and Byrne, H. M. and Flegg, M. B. and McElwain, D. L. S. (2011) Wound healing angiogenesis the clinical implications of a simple mathematical model. Journal of Theoretical Biology . (Submitted)

Osborne, J and Walter, A and Kershaw, S K and Mirams, G R and Fletcher, A G and Pathmanathan, P and Gavaghan, D. J. and Jensen, O E and Maini, P. K. and Byrne, H. M. (2010) A hybrid approach to multi-scale modelling of cancer. Philosophical Transactions of the Royal Society A, 368 (1930). pp. 5013-5028. ISSN 0962-8428

Osborne, J. M. and O'Dea, R. D. and Whiteley, J. P. and Byrne, H. M. and Waters, S. L. (2010) The influence of bioreactor geometry and the mechanical
environment on engineered tissues. ASME Journal of Biomechanical Engineering, 132 No. 5 (pp 51006).

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and Hutmacher, D. W. and McElwain, D. L. S. (2010) Modeling the growth of multicellular cancer spheroids in a
bioengineered 3D microenvironment and their treatment with an
anti-cancer drug. PLoS Computational Biology . (Submitted)

Murray, P J and Kang, J W and Mirams, G R and Shin, S Y and Byrne, H. M. and Maini, P. K. and Cho, K H (2010) Modelling spatially regulated B-catenin dynamics & invasion in intestinal crypts. Biophysical Journal , 99 (3). pp. 716-725.

Stamper, I. J. and Owen , M R and Maini, P. K. and Byrne, H. M. (2010) Oscillatory dynamics in a model of vascular tumour growth -- implications for chemotherapy. Biology Direct, 5 (27). pp. 1-17.

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Owen, M. R. and Alarcon, T. and Maini, P. K. and Byrne, H. M. (2009) Angiogenesis and vascular remodelling in normal and cancerous tissues. Journal of Mathematical Biology, 58 (4-5). pp. 689-721.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

van Leeuwen, I. M. M. and Byrne, H. M. and Johnston, M. D. and Edwards, C. M. and Chapman, S. J. and Bodmer, W. F. and Maini, P. K. (2008) Modelling multiscale aspects of colorectal cancer. AIP Conference Proceedings, 971 (1). pp. 3-7.

Byrne, H. M. and van Leeuwen, I. M. M. and Owen, M. R. and Alarcon, T. and Maini, P. K. (2008) Multiscale modelling of solid tumour growth. In: Selected Topics in Cancer Modeling. Genesis, Evolution, Immune Competition, & Therapy, n/a (n/a). Birkhauser, Boston, USA, pp. 449-473. ISBN 978-0-8176-4712-4

Panovska, J. and Byrne, H. M. and Maini, P. K. (2008) A theoretical study of the response of vascular tumours to different types of chemotherapy. Mathematical and Computer Modelling, 47 (5-6). pp. 560-579.

Panovska, J. and Byrne, H. M. and Maini, P. K. (2007) Mathematical modelling of vascular tumour growth and implications for therapy. In: Mathematical Modeling of Biological Systems. Modeling and Simulation in Science, Engineering and Technology, I (n/a). Birkhauser, Boston, pp. 205-216. ISBN n/a

Stamper, I. J. and Byrne, H. M. and Maini, P. K. (2007) Modelling the role of angiogenesis and vasculogenesis in solid tumuour growth. Bulletin of Mathematical Biology, 69 (8). pp. 2737-2772. ISSN n/a

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Betteridge, R. and Owen, M. R. and Byrne, H. M. and Alarcon, T. and Maini, P. K. (2006) The impact of cell crowding and active cell movement on vascular tumour growth. Networks and Heterogeneous Media, 1 (4). pp. 515-535.

Byrne, H. M. and Owen, M. R. and Alarcon, T. and Murphy, J. and Maini, P. K. (2006) Modelling the response of vascular tumours to chemotherapy: A multiscale approach. Mathematical Models and Methods in Applied Sciences, 16 (7S). pp. 1219-1241.

Byrne, H. M. and Alarcon, T. and Owen, M. R. and Webb, S. D. and Maini, P. K. (2006) Modelling aspects of cancer dynamics: a review. Philosophical Transactions of the Royal Society A, 364 (1843). pp. 1563-1578.

Alarcon, T. and Owen, M. R. and Byrne, H. M. and Maini, P. K. (2006) Multiscale modelling of tumour growth and therapy: the influence of vessel normalisation on chemotherapy. Computational & Mathematical Methods in Medicine, 7 (2-3). pp. 85-119.

Byrne, H. M. and Owen, M. R. and Alarcon, T. and Maini, P. K. (2006) Cancer disease: integrative modelling approaches. 3rd IEEE International Symposium on Biomedical Imaging (1). pp. 806-809.

Marchant, Ben P. and Norbury, John and Byrne, H. M. (2006) Biphasic behaviour in malignant invasion. Mathematical Medicine and Biology, 23 (3). pp. 173-196.

Alarcon, T. and Byrne, H. M. and Maini, P. K. and Panovska, J. (2006) Mathematical modelling of angiogenesis and vascular adaptation. In, Multidisciplinary Approaches to the Theory of Medicine, R. Paton and L.A. McNamara (eds) Studies in Multidisciplinarity,, 3 . pp. 369-387.

Maini, P. K. and Alarcon, T. and Byrne, H. M. (2006) Modelling aspects of vascular cancer development. Proceedings of the International Symposium on Mathematical and Computational Biology, R.P. Mondaini and R. Dilao (eds), World Scientific . 1 -12.

Byrne, H. M. and Alarcon, T. and Maini, P. K. (2005) Cancer modelling: Getting to the heart of the problem. Journal of Physiology, 561P, SA9 . 4P.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2005) A design principle for vascular beds: the effects of complex blood rheology. Microvascular Research, 69 (3). pp. 156-172.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2005) A multiple scale model for tumor growth. Multiscale Model Simulation, 3 (2). pp. 440-475.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2004) A mathematical model of the effects of hypoxia on the cell-cycle of normal and cancer cells. Journal of theoretical Biology, 229 (3). pp. 395-411.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2004) Towards whole-organ modelling of tumour growth. Progress in Biophysics and Molecular Biology, 85 (2-3). pp. 451-472.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2003) A cellular automaton model for tumour growth in inhomogeneous environment. Journal of Theoretical Biology, 225 (2). pp. 257-274.

Breward, C. J. W. and Byrne, H. M. and Lewis, C. E. (2003) A multiphase model describing vascular tumour growth. Bulletin of Mathematical Biology, 65 . pp. 609-640.

Breward, C. J. W. and Byrne, H. M. and Lewis, C. E. (2002) The role of cell-cell interactions in a two-phase model for avascular tumour growth. Journal of Mathematical Biology, 45 (2). pp. 125-152.

Cascante, M

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Chapman, S

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

van Leeuwen, I. M. M. and Byrne, H. M. and Johnston, M. D. and Edwards, C. M. and Chapman, S. J. and Bodmer, W. F. and Maini, P. K. (2008) Modelling multiscale aspects of colorectal cancer. AIP Conference Proceedings, 971 (1). pp. 3-7.

Chen, T

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Cho, K

Murray, P J and Kang, J W and Mirams, G R and Shin, S Y and Byrne, H. M. and Maini, P. K. and Cho, K H (2010) Modelling spatially regulated B-catenin dynamics & invasion in intestinal crypts. Biophysical Journal , 99 (3). pp. 716-725.

Ciliberto, A

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Clements, J

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and McElwain, D. L. S. and Hutmacher, D. W. (2011) Growth of confined cancer spheroids: a combined experimental and mathematical modelling approach. Integrative Biology . (Submitted)

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and Hutmacher, D. W. and McElwain, D. L. S. (2010) Modeling the growth of multicellular cancer spheroids in a
bioengineered 3D microenvironment and their treatment with an
anti-cancer drug. PLoS Computational Biology . (Submitted)

Cooper, J

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Dale, T

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Davit, Y

Davit, Y. and Byrne, H. M. and Osborne, J. M. and Pitt-Francis, J. M. and Gavaghan, D. J. and Quintard, M. (2012) Solute transport within porous biofilms: diffusion or dispersion? Physical Review E . (Submitted)

Doyle, B

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Drasdo, D

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Edwards, C

van Leeuwen, I. M. M. and Byrne, H. M. and Johnston, M. D. and Edwards, C. M. and Chapman, S. J. and Bodmer, W. F. and Maini, P. K. (2008) Modelling multiscale aspects of colorectal cancer. AIP Conference Proceedings, 971 (1). pp. 3-7.

Estrella, V

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Fell, D

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Ferrell, J

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Flegg, J

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and McElwain, D. L. S. and Hutmacher, D. W. (2011) Growth of confined cancer spheroids: a combined experimental and mathematical modelling approach. Integrative Biology . (Submitted)

Flegg, J. A. and Byrne, H. M. and Flegg, M. B. and McElwain, D. L. S. (2011) Wound healing angiogenesis the clinical implications of a simple mathematical model. Journal of Theoretical Biology . (Submitted)

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and Hutmacher, D. W. and McElwain, D. L. S. (2010) Modeling the growth of multicellular cancer spheroids in a
bioengineered 3D microenvironment and their treatment with an
anti-cancer drug. PLoS Computational Biology . (Submitted)

Flegg, M

Flegg, J. A. and Byrne, H. M. and Flegg, M. B. and McElwain, D. L. S. (2011) Wound healing angiogenesis the clinical implications of a simple mathematical model. Journal of Theoretical Biology . (Submitted)

Fletcher, A

Osborne, J and Walter, A and Kershaw, S K and Mirams, G R and Fletcher, A G and Pathmanathan, P and Gavaghan, D. J. and Jensen, O E and Maini, P. K. and Byrne, H. M. (2010) A hybrid approach to multi-scale modelling of cancer. Philosophical Transactions of the Royal Society A, 368 (1930). pp. 5013-5028. ISSN 0962-8428

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Gallahan, D

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Garny, A

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

Gatenby, R

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Gavaghan, D

Davit, Y. and Byrne, H. M. and Osborne, J. M. and Pitt-Francis, J. M. and Gavaghan, D. J. and Quintard, M. (2012) Solute transport within porous biofilms: diffusion or dispersion? Physical Review E . (Submitted)

Osborne, J and Walter, A and Kershaw, S K and Mirams, G R and Fletcher, A G and Pathmanathan, P and Gavaghan, D. J. and Jensen, O E and Maini, P. K. and Byrne, H. M. (2010) A hybrid approach to multi-scale modelling of cancer. Philosophical Transactions of the Royal Society A, 368 (1930). pp. 5013-5028. ISSN 0962-8428

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Gilles, R

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Guenther, U

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Hall, C

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and McElwain, D. L. S. and Hutmacher, D. W. (2011) Growth of confined cancer spheroids: a combined experimental and mathematical modelling approach. Integrative Biology . (Submitted)

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and Hutmacher, D. W. and McElwain, D. L. S. (2010) Modeling the growth of multicellular cancer spheroids in a
bioengineered 3D microenvironment and their treatment with an
anti-cancer drug. PLoS Computational Biology . (Submitted)

Harms, B

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Herzel, H

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Hutmacher, D

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and McElwain, D. L. S. and Hutmacher, D. W. (2011) Growth of confined cancer spheroids: a combined experimental and mathematical modelling approach. Integrative Biology . (Submitted)

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and Hutmacher, D. W. and McElwain, D. L. S. (2010) Modeling the growth of multicellular cancer spheroids in a
bioengineered 3D microenvironment and their treatment with an
anti-cancer drug. PLoS Computational Biology . (Submitted)

Jain, H

Jain, H. V. and Moldovan, N. I. and Byrne, H. M. (2012) Modeling Stem/Progenitor Cell-Induced Neovascularization and
Oxygenation around Solid Implants. Tissue Engineering Part C . (Submitted)

Jain, H. V. and Byrne, H. M. (2012) Qualitative Analysis of an Integro-Differential Equation Model of Periodic Chemotherapy. Applied Maths Letters . (Submitted)

Jaster, R

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Jensen, O

Osborne, J and Walter, A and Kershaw, S K and Mirams, G R and Fletcher, A G and Pathmanathan, P and Gavaghan, D. J. and Jensen, O E and Maini, P. K. and Byrne, H. M. (2010) A hybrid approach to multi-scale modelling of cancer. Philosophical Transactions of the Royal Society A, 368 (1930). pp. 5013-5028. ISSN 0962-8428

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Johnston, M

van Leeuwen, I. M. M. and Byrne, H. M. and Johnston, M. D. and Edwards, C. M. and Chapman, S. J. and Bodmer, W. F. and Maini, P. K. (2008) Modelling multiscale aspects of colorectal cancer. AIP Conference Proceedings, 971 (1). pp. 3-7.

Junghanss, C

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Kang, J

Murray, P J and Kang, J W and Mirams, G R and Shin, S Y and Byrne, H. M. and Maini, P. K. and Cho, K H (2010) Modelling spatially regulated B-catenin dynamics & invasion in intestinal crypts. Biophysical Journal , 99 (3). pp. 716-725.

Kershaw, S

Osborne, J and Walter, A and Kershaw, S K and Mirams, G R and Fletcher, A G and Pathmanathan, P and Gavaghan, D. J. and Jensen, O E and Maini, P. K. and Byrne, H. M. (2010) A hybrid approach to multi-scale modelling of cancer. Philosophical Transactions of the Royal Society A, 368 (1930). pp. 5013-5028. ISSN 0962-8428

King, J

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Kunz, M

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Lapin, A

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Laplace, F

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Lenormand, P

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Levi, F

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Lewis, C

Breward, C. J. W. and Byrne, H. M. and Lewis, C. E. (2003) A multiphase model describing vascular tumour growth. Bulletin of Mathematical Biology, 65 . pp. 609-640.

Breward, C. J. W. and Byrne, H. M. and Lewis, C. E. (2002) The role of cell-cell interactions in a two-phase model for avascular tumour growth. Journal of Mathematical Biology, 45 (2). pp. 125-152.

Linnebacher, M

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Lloyd, M

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Loessner, D

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and McElwain, D. L. S. and Hutmacher, D. W. (2011) Growth of confined cancer spheroids: a combined experimental and mathematical modelling approach. Integrative Biology . (Submitted)

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and Hutmacher, D. W. and McElwain, D. L. S. (2010) Modeling the growth of multicellular cancer spheroids in a
bioengineered 3D microenvironment and their treatment with an
anti-cancer drug. PLoS Computational Biology . (Submitted)

Lowengrub, J

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Madzvamuse, A

Sekimura, T. and Madzvamuse, A. and Maini, P. K. (2007) Pigmentation pattern formation in butterfly wigns: Global patterns on fore- and hind-wing. In: Mathematical Modeling of Biological Systems. Modeling & Simulation in Science, Engineering and Technology, 1 (n/a). Birkhauser, Boston, pp. 141-148. ISBN n/a

Maini, P

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Osborne, J and Walter, A and Kershaw, S K and Mirams, G R and Fletcher, A G and Pathmanathan, P and Gavaghan, D. J. and Jensen, O E and Maini, P. K. and Byrne, H. M. (2010) A hybrid approach to multi-scale modelling of cancer. Philosophical Transactions of the Royal Society A, 368 (1930). pp. 5013-5028. ISSN 0962-8428

Murray, P J and Kang, J W and Mirams, G R and Shin, S Y and Byrne, H. M. and Maini, P. K. and Cho, K H (2010) Modelling spatially regulated B-catenin dynamics & invasion in intestinal crypts. Biophysical Journal , 99 (3). pp. 716-725.

Stamper, I. J. and Owen , M R and Maini, P. K. and Byrne, H. M. (2010) Oscillatory dynamics in a model of vascular tumour growth -- implications for chemotherapy. Biology Direct, 5 (27). pp. 1-17.

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Owen, M. R. and Alarcon, T. and Maini, P. K. and Byrne, H. M. (2009) Angiogenesis and vascular remodelling in normal and cancerous tissues. Journal of Mathematical Biology, 58 (4-5). pp. 689-721.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

van Leeuwen, I. M. M. and Byrne, H. M. and Johnston, M. D. and Edwards, C. M. and Chapman, S. J. and Bodmer, W. F. and Maini, P. K. (2008) Modelling multiscale aspects of colorectal cancer. AIP Conference Proceedings, 971 (1). pp. 3-7.

Byrne, H. M. and van Leeuwen, I. M. M. and Owen, M. R. and Alarcon, T. and Maini, P. K. (2008) Multiscale modelling of solid tumour growth. In: Selected Topics in Cancer Modeling. Genesis, Evolution, Immune Competition, & Therapy, n/a (n/a). Birkhauser, Boston, USA, pp. 449-473. ISBN 978-0-8176-4712-4

Panovska, J. and Byrne, H. M. and Maini, P. K. (2008) A theoretical study of the response of vascular tumours to different types of chemotherapy. Mathematical and Computer Modelling, 47 (5-6). pp. 560-579.

Panovska, J. and Byrne, H. M. and Maini, P. K. (2007) Mathematical modelling of vascular tumour growth and implications for therapy. In: Mathematical Modeling of Biological Systems. Modeling and Simulation in Science, Engineering and Technology, I (n/a). Birkhauser, Boston, pp. 205-216. ISBN n/a

Stamper, I. J. and Byrne, H. M. and Maini, P. K. (2007) Modelling the role of angiogenesis and vasculogenesis in solid tumuour growth. Bulletin of Mathematical Biology, 69 (8). pp. 2737-2772. ISSN n/a

Sekimura, T. and Madzvamuse, A. and Maini, P. K. (2007) Pigmentation pattern formation in butterfly wigns: Global patterns on fore- and hind-wing. In: Mathematical Modeling of Biological Systems. Modeling & Simulation in Science, Engineering and Technology, 1 (n/a). Birkhauser, Boston, pp. 141-148. ISBN n/a

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Betteridge, R. and Owen, M. R. and Byrne, H. M. and Alarcon, T. and Maini, P. K. (2006) The impact of cell crowding and active cell movement on vascular tumour growth. Networks and Heterogeneous Media, 1 (4). pp. 515-535.

Byrne, H. M. and Owen, M. R. and Alarcon, T. and Murphy, J. and Maini, P. K. (2006) Modelling the response of vascular tumours to chemotherapy: A multiscale approach. Mathematical Models and Methods in Applied Sciences, 16 (7S). pp. 1219-1241.

Byrne, H. M. and Alarcon, T. and Owen, M. R. and Webb, S. D. and Maini, P. K. (2006) Modelling aspects of cancer dynamics: a review. Philosophical Transactions of the Royal Society A, 364 (1843). pp. 1563-1578.

Alarcon, T. and Owen, M. R. and Byrne, H. M. and Maini, P. K. (2006) Multiscale modelling of tumour growth and therapy: the influence of vessel normalisation on chemotherapy. Computational & Mathematical Methods in Medicine, 7 (2-3). pp. 85-119.

Byrne, H. M. and Owen, M. R. and Alarcon, T. and Maini, P. K. (2006) Cancer disease: integrative modelling approaches. 3rd IEEE International Symposium on Biomedical Imaging (1). pp. 806-809.

Alarcon, T. and Byrne, H. M. and Maini, P. K. and Panovska, J. (2006) Mathematical modelling of angiogenesis and vascular adaptation. In, Multidisciplinary Approaches to the Theory of Medicine, R. Paton and L.A. McNamara (eds) Studies in Multidisciplinarity,, 3 . pp. 369-387.

Maini, P. K. and Alarcon, T. and Byrne, H. M. (2006) Modelling aspects of vascular cancer development. Proceedings of the International Symposium on Mathematical and Computational Biology, R.P. Mondaini and R. Dilao (eds), World Scientific . 1 -12.

Byrne, H. M. and Alarcon, T. and Maini, P. K. (2005) Cancer modelling: Getting to the heart of the problem. Journal of Physiology, 561P, SA9 . 4P.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2005) A design principle for vascular beds: the effects of complex blood rheology. Microvascular Research, 69 (3). pp. 156-172.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2005) A multiple scale model for tumor growth. Multiscale Model Simulation, 3 (2). pp. 440-475.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2004) A mathematical model of the effects of hypoxia on the cell-cycle of normal and cancer cells. Journal of theoretical Biology, 229 (3). pp. 395-411.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2004) Towards whole-organ modelling of tumour growth. Progress in Biophysics and Molecular Biology, 85 (2-3). pp. 451-472.

Alarcon, T. and Byrne, H. M. and Maini, P. K. (2003) A cellular automaton model for tumour growth in inhomogeneous environment. Journal of Theoretical Biology, 225 (2). pp. 257-274.

Malik, A

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Marchant, B

Marchant, Ben P. and Norbury, John and Byrne, H. M. (2006) Biphasic behaviour in malignant invasion. Mathematical Medicine and Biology, 23 (3). pp. 173-196.

Marcus, F

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

McElwain, D

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and McElwain, D. L. S. and Hutmacher, D. W. (2011) Growth of confined cancer spheroids: a combined experimental and mathematical modelling approach. Integrative Biology . (Submitted)

Flegg, J. A. and Byrne, H. M. and Flegg, M. B. and McElwain, D. L. S. (2011) Wound healing angiogenesis the clinical implications of a simple mathematical model. Journal of Theoretical Biology . (Submitted)

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and Hutmacher, D. W. and McElwain, D. L. S. (2010) Modeling the growth of multicellular cancer spheroids in a
bioengineered 3D microenvironment and their treatment with an
anti-cancer drug. PLoS Computational Biology . (Submitted)

Mirams, G

Osborne, J and Walter, A and Kershaw, S K and Mirams, G R and Fletcher, A G and Pathmanathan, P and Gavaghan, D. J. and Jensen, O E and Maini, P. K. and Byrne, H. M. (2010) A hybrid approach to multi-scale modelling of cancer. Philosophical Transactions of the Royal Society A, 368 (1930). pp. 5013-5028. ISSN 0962-8428

Murray, P J and Kang, J W and Mirams, G R and Shin, S Y and Byrne, H. M. and Maini, P. K. and Cho, K H (2010) Modelling spatially regulated B-catenin dynamics & invasion in intestinal crypts. Biophysical Journal , 99 (3). pp. 716-725.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Moldovan, N

Jain, H. V. and Moldovan, N. I. and Byrne, H. M. (2012) Modeling Stem/Progenitor Cell-Induced Neovascularization and
Oxygenation around Solid Implants. Tissue Engineering Part C . (Submitted)

Momtahan, L

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Moroney, T

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and McElwain, D. L. S. and Hutmacher, D. W. (2011) Growth of confined cancer spheroids: a combined experimental and mathematical modelling approach. Integrative Biology . (Submitted)

Loessner, D. and Flegg, J. A. and Byrne, H. M. and Hall, C. L. and Moroney, T. J. and Clements, J. A. and Hutmacher, D. W. and McElwain, D. L. S. (2010) Modeling the growth of multicellular cancer spheroids in a
bioengineered 3D microenvironment and their treatment with an
anti-cancer drug. PLoS Computational Biology . (Submitted)

Murphy, J

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Byrne, H. M. and Owen, M. R. and Alarcon, T. and Murphy, J. and Maini, P. K. (2006) Modelling the response of vascular tumours to chemotherapy: A multiscale approach. Mathematical Models and Methods in Applied Sciences, 16 (7S). pp. 1219-1241.

Murray, P

Murray, P J and Kang, J W and Mirams, G R and Shin, S Y and Byrne, H. M. and Maini, P. K. and Cho, K H (2010) Modelling spatially regulated B-catenin dynamics & invasion in intestinal crypts. Biophysical Journal , 99 (3). pp. 716-725.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Norbury, J

Marchant, Ben P. and Norbury, John and Byrne, H. M. (2006) Biphasic behaviour in malignant invasion. Mathematical Medicine and Biology, 23 (3). pp. 173-196.

O'Dea, R

Osborne, J. M. and O'Dea, R. D. and Whiteley, J. P. and Byrne, H. M. and Waters, S. L. (2010) The influence of bioreactor geometry and the mechanical
environment on engineered tissues. ASME Journal of Biomechanical Engineering, 132 No. 5 (pp 51006).

Osborne, J

Davit, Y. and Byrne, H. M. and Osborne, J. M. and Pitt-Francis, J. M. and Gavaghan, D. J. and Quintard, M. (2012) Solute transport within porous biofilms: diffusion or dispersion? Physical Review E . (Submitted)

Osborne, J and Walter, A and Kershaw, S K and Mirams, G R and Fletcher, A G and Pathmanathan, P and Gavaghan, D. J. and Jensen, O E and Maini, P. K. and Byrne, H. M. (2010) A hybrid approach to multi-scale modelling of cancer. Philosophical Transactions of the Royal Society A, 368 (1930). pp. 5013-5028. ISSN 0962-8428

Osborne, J. M. and O'Dea, R. D. and Whiteley, J. P. and Byrne, H. M. and Waters, S. L. (2010) The influence of bioreactor geometry and the mechanical
environment on engineered tissues. ASME Journal of Biomechanical Engineering, 132 No. 5 (pp 51006).

Osbourne, J

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Owen , M

Stamper, I. J. and Owen , M R and Maini, P. K. and Byrne, H. M. (2010) Oscillatory dynamics in a model of vascular tumour growth -- implications for chemotherapy. Biology Direct, 5 (27). pp. 1-17.

Owen, M

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Owen, M. R. and Alarcon, T. and Maini, P. K. and Byrne, H. M. (2009) Angiogenesis and vascular remodelling in normal and cancerous tissues. Journal of Mathematical Biology, 58 (4-5). pp. 689-721.

Byrne, H. M. and van Leeuwen, I. M. M. and Owen, M. R. and Alarcon, T. and Maini, P. K. (2008) Multiscale modelling of solid tumour growth. In: Selected Topics in Cancer Modeling. Genesis, Evolution, Immune Competition, & Therapy, n/a (n/a). Birkhauser, Boston, USA, pp. 449-473. ISBN 978-0-8176-4712-4

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Maini, P. K. and Alarcon, T. and Byrne, H. M. and Owen, M. R. and Murphy, J. (2007) Structural adaptation in normal and cancerous vasculature. In: In: MathEverywhere: Deterministic and Stochastic Modelling in Biomedicine, Economics and Industry. Springer, Berlin, Germany, pp. 165-178. ISBN 3-540-44445-9

Betteridge, R. and Owen, M. R. and Byrne, H. M. and Alarcon, T. and Maini, P. K. (2006) The impact of cell crowding and active cell movement on vascular tumour growth. Networks and Heterogeneous Media, 1 (4). pp. 515-535.

Byrne, H. M. and Owen, M. R. and Alarcon, T. and Murphy, J. and Maini, P. K. (2006) Modelling the response of vascular tumours to chemotherapy: A multiscale approach. Mathematical Models and Methods in Applied Sciences, 16 (7S). pp. 1219-1241.

Byrne, H. M. and Alarcon, T. and Owen, M. R. and Webb, S. D. and Maini, P. K. (2006) Modelling aspects of cancer dynamics: a review. Philosophical Transactions of the Royal Society A, 364 (1843). pp. 1563-1578.

Alarcon, T. and Owen, M. R. and Byrne, H. M. and Maini, P. K. (2006) Multiscale modelling of tumour growth and therapy: the influence of vessel normalisation on chemotherapy. Computational & Mathematical Methods in Medicine, 7 (2-3). pp. 85-119.

Byrne, H. M. and Owen, M. R. and Alarcon, T. and Maini, P. K. (2006) Cancer disease: integrative modelling approaches. 3rd IEEE International Symposium on Biomedical Imaging (1). pp. 806-809.

Panovska, J

Panovska, J. and Byrne, H. M. and Maini, P. K. (2008) A theoretical study of the response of vascular tumours to different types of chemotherapy. Mathematical and Computer Modelling, 47 (5-6). pp. 560-579.

Panovska, J. and Byrne, H. M. and Maini, P. K. (2007) Mathematical modelling of vascular tumour growth and implications for therapy. In: Mathematical Modeling of Biological Systems. Modeling and Simulation in Science, Engineering and Technology, I (n/a). Birkhauser, Boston, pp. 205-216. ISBN n/a

Alarcon, T. and Byrne, H. M. and Maini, P. K. and Panovska, J. (2006) Mathematical modelling of angiogenesis and vascular adaptation. In, Multidisciplinary Approaches to the Theory of Medicine, R. Paton and L.A. McNamara (eds) Studies in Multidisciplinarity,, 3 . pp. 369-387.

Pathmanathan, P

Osborne, J and Walter, A and Kershaw, S K and Mirams, G R and Fletcher, A G and Pathmanathan, P and Gavaghan, D. J. and Jensen, O E and Maini, P. K. and Byrne, H. M. (2010) A hybrid approach to multi-scale modelling of cancer. Philosophical Transactions of the Royal Society A, 368 (1930). pp. 5013-5028. ISSN 0962-8428

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Perfahl, H

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Pitt-Francis, J

Davit, Y. and Byrne, H. M. and Osborne, J. M. and Pitt-Francis, J. M. and Gavaghan, D. J. and Quintard, M. (2012) Solute transport within porous biofilms: diffusion or dispersion? Physical Review E . (Submitted)

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Quintard, M

Davit, Y. and Byrne, H. M. and Osborne, J. M. and Pitt-Francis, J. M. and Gavaghan, D. J. and Quintard, M. (2012) Solute transport within porous biofilms: diffusion or dispersion? Physical Review E . (Submitted)

Rateitschak, K

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Reuss, M

Perfahl, H and Byrne, H. M. and Chen, T and Estrella, V and Alarcon,, T and Lapin, A and Gatenby, R. A. and Gilles, R and Lloyd, M C and Maini, P. K. and Reuss, M and Owen, M. R. (2011) Multiscale modelling of vascular tumour growth in 3D: the roles of domain size & boundary condition. PLOs One, 6 (4). 17 pages.

Rodriguez, B

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

Sansom, O

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Schafer, R

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Schnell, S

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Schurrle, K

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Sekimura, T

Sekimura, T. and Madzvamuse, A. and Maini, P. K. (2007) Pigmentation pattern formation in butterfly wigns: Global patterns on fore- and hind-wing. In: Mathematical Modeling of Biological Systems. Modeling & Simulation in Science, Engineering and Technology, 1 (n/a). Birkhauser, Boston, pp. 141-148. ISBN n/a

Sers, C

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Shibata, D

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Shin, S

Murray, P J and Kang, J W and Mirams, G R and Shin, S Y and Byrne, H. M. and Maini, P. K. and Cho, K H (2010) Modelling spatially regulated B-catenin dynamics & invasion in intestinal crypts. Biophysical Journal , 99 (3). pp. 716-725.

Stamper, I

Stamper, I. J. and Owen , M R and Maini, P. K. and Byrne, H. M. (2010) Oscillatory dynamics in a model of vascular tumour growth -- implications for chemotherapy. Biology Direct, 5 (27). pp. 1-17.

Stamper, I. J. and Byrne, H. M. and Maini, P. K. (2007) Modelling the role of angiogenesis and vasculogenesis in solid tumuour growth. Bulletin of Mathematical Biology, 69 (8). pp. 2737-2772. ISSN n/a

Tyson, J

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Varma, S

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Vera, J

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Walter, A

Osborne, J and Walter, A and Kershaw, S K and Mirams, G R and Fletcher, A G and Pathmanathan, P and Gavaghan, D. J. and Jensen, O E and Maini, P. K. and Byrne, H. M. (2010) A hybrid approach to multi-scale modelling of cancer. Philosophical Transactions of the Royal Society A, 368 (1930). pp. 5013-5028. ISSN 0962-8428

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Waters, S

Osborne, J. M. and O'Dea, R. D. and Whiteley, J. P. and Byrne, H. M. and Waters, S. L. (2010) The influence of bioreactor geometry and the mechanical
environment on engineered tissues. ASME Journal of Biomechanical Engineering, 132 No. 5 (pp 51006).

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Webb, S

Byrne, H. M. and Alarcon, T. and Owen, M. R. and Webb, S. D. and Maini, P. K. (2006) Modelling aspects of cancer dynamics: a review. Philosophical Transactions of the Royal Society A, 364 (1843). pp. 1563-1578.

White, M

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Whiteley, J

Osborne, J. M. and O'Dea, R. D. and Whiteley, J. P. and Byrne, H. M. and Waters, S. L. (2010) The influence of bioreactor geometry and the mechanical
environment on engineered tissues. ASME Journal of Biomechanical Engineering, 132 No. 5 (pp 51006).

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Wolkenhauer, O

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Young, S

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

Zhivotovsky, B

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

van Leeuwen, I

Drasdo, D and Fell, D and Ferrell, J and Gallahan, D and Gatenby, R. A. and Guenther, U and Herzel, H. and Junghanss, C and Kunz, M and Laplace, F and van Leeuwen, I. M. M. and Lenormand, P and Levi, F and Linnebacher, M and Lowengrub, J and Maini, P. K. and Marcus, F and Malik, A and Rateitschak, K and Sansom, O and Schafer, R and Schurrle, K and Sers, C and Schnell, S. and Harms, B and Shibata, D and Tyson, J and Vera, J and White, M and Zhivotovsky, B and Jaster, R and Wolkenhauer, O and Auffray, C and Baltrusch, S and Bluthgen, N and Byrne, H. M. and Cascante, M and Ciliberto, A and Dale, T (2010) Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Research, 70 (1). pp. 12-13.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A G and Mirams, G R and Murray, P J and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Waters, S L and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for biological modelling. Computer Physics Communications, 180 (12). pp. 2452-2471.

Pitt-Francis, J and Pathmanathan, P and Bernabeu, M O and Bordas, R and Cooper, J and Fletcher, A and Mirams, G R and Murray, P and Osbourne, J and Walter, A and Chapman, S. J. and Garny, A. and van Leeuwen, I. M. M. and Maini, P. K. and Rodriguez, B and Whiteley, J P and Byrne, H. M. and Gavaghan, D. J. (2009) Chaste: a test-driven approach to software development for physiological modelling. Not specified . (Submitted)

van Leeuwen, I. M. M. and Mirams, G R and Walter, A and Fletcher, A and Murray, P and Osbourne, J and Varma, S and Young, S J and Cooper, J and Doyle, B and Pitt-Francis, J and Momtahan, L and Pathmanathan, P and Whiteley, J P and Chapman, S. J. and Gavaghan, D. J. and Jensen, O E and King, J R and Maini, P. K. and Waters, S L and Byrne, H. M. (2009) An integrative computational model for intestinal tissue renewal. Cell Proliferation, 42 (5). pp. 617-636.

van Leeuwen, I. M. M. and Byrne, H. M. and Johnston, M. D. and Edwards, C. M. and Chapman, S. J. and Bodmer, W. F. and Maini, P. K. (2008) Modelling multiscale aspects of colorectal cancer. AIP Conference Proceedings, 971 (1). pp. 3-7.

Byrne, H. M. and van Leeuwen, I. M. M. and Owen, M. R. and Alarcon, T. and Maini, P. K. (2008) Multiscale modelling of solid tumour growth. In: Selected Topics in Cancer Modeling. Genesis, Evolution, Immune Competition, & Therapy, n/a (n/a). Birkhauser, Boston, USA, pp. 449-473. ISBN 978-0-8176-4712-4